Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig47_4PFAMPF00263Bacterial type II and III secretion system proteincontig47CDS31975050-0
contig47_5EggNOGCOG3031@1|root,COG3031@2|Bacteria,1RD3I@1224|Proteobacteria,1RQKA@1236|Gammaproteobacteria,1XU1I@135623|VibrionalesUcontig47CDS50585963-0
contig47_5KEGGK02452general secretion pathway protein Ccontig47CDS50585963-0
contig47_5IPRSCANIPR024961Type II secretion system protein GspC, N-terminalcontig47CDS50585963-0
contig47_5PFAMPF11356Type II secretion system protein Ccontig47CDS50585963-0
contig48_1EggNOGCOG0398@1|root,COG0398@2|Bacteria,1P9BB@1224|Proteobacteria,1SUJE@1236|GammaproteobacteriaScontig48CDS308868-0
contig48_1KEGGK26731K+:H+ antiportercontig48CDS308868-0
contig48_1IPRSCANIPR032816VTT domaincontig48CDS308868-0
contig48_1PFAMPF09335SNARE associated Golgi proteincontig48CDS308868-0
contig48_2EggNOGCOG0189@1|root,COG0189@2|Bacteria,1MVN2@1224|Proteobacteria,1RS1C@1236|GammaproteobacteriaHJcontig48CDS8551754-0
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