Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig46_1EggNOGCOG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,1MV6G@1224|Proteobacteria,1RMYD@1236|Gammaproteobacteria,1J4ZR@118884|unclassified GammaproteobacteriaEcontig46CDS12271+10
contig46_1CAZyCUS04494.2GH39contig46CDS12271+10
contig46_1KEGGK005485-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]contig46CDS12271+10
contig46_1GOGO:0008705;GO:0009086;methionine synthase activity; methionine biosynthetic process;contig46CDS12271+10
contig46_1IPRSCANIPR004223Vitamin B12-dependent methionine synthase, activation domaincontig46CDS12271+10
contig46_1PFAMPF02965Vitamin B12 dependent methionine synthase, activation domaincontig46CDS12271+10
contig46_2EggNOG2EAXT@1|root,334YV@2|Bacteria,1N7HX@1224|Proteobacteria,1SFYC@1236|Gammaproteobacteria-contig46CDS26053495-1
contig46_2KEGGK26739PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulatorcontig46CDS26053495-1
contig47_2EggNOGCOG1459@1|root,COG1459@2|Bacteria,1MV4U@1224|Proteobacteria,1RQ86@1236|Gammaproteobacteria,1WXA3@135613|ChromatialesUcontig47CDS4841692-0
contig47_2KEGGK02455general secretion pathway protein Fcontig47CDS4841692-0
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