Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig41_9EggNOGCOG0325@1|root,COG0325@2|Bacteria,1MWN7@1224|Proteobacteria,1RNPM@1236|Gammaproteobacteria,1J61Q@118884|unclassified GammaproteobacteriaScontig41CDS90569700+0
contig41_9KEGGK06997PLP dependent proteincontig41CDS90569700+0
contig41_9IPRSCANIPR001608Alanine racemase, N-terminalcontig41CDS90569700+0
contig41_9PFAMPF01168Alanine racemase, N-terminal domaincontig41CDS90569700+0
contig42_1EggNOGCOG0287@1|root,COG0287@2|Bacteria,1QTZA@1224|Proteobacteria,1T20F@1236|GammaproteobacteriaEcontig42CDS2460+10
contig42_1KEGGK24018cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]contig42CDS2460+10
contig42_1IPRSCANIPR046825Prephenate dehydrogenase, dimerization domaincontig42CDS2460+10
contig42_1PFAMPF20463Prephenate dehydrogenase, dimerization domaincontig42CDS2460+10
contig42_10EggNOGCOG0682@1|root,COG0682@2|Bacteria,1MVE3@1224|Proteobacteria,1RMVK@1236|Gammaproteobacteria,1J8M9@118884|unclassified GammaproteobacteriaMcontig42CDS76118387+0
contig42_10KEGGK13292phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]contig42CDS76118387+0
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