Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig4_3PFAMPF01494FAD binding domaincontig4CDS13522578+0
contig4_4EggNOGCOG0259@1|root,COG0259@2|Bacteria,1NZUU@1224|Proteobacteria,1RMQ2@1236|Gammaproteobacteria,1J5RI@118884|unclassified GammaproteobacteriaHcontig4CDS25973235+0
contig4_4KEGGK00275pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]contig4CDS25973235+0
contig4_4IPRSCANIPR019576Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminalcontig4CDS25973235+0
contig4_4PFAMPF10590Pyridoxine 5'-phosphate oxidase C-terminal dimerisation regioncontig4CDS25973235+0
contig4_5EggNOGCOG0169@1|root,COG0169@2|Bacteria,1MVH4@1224|Proteobacteria,1RPB7@1236|Gammaproteobacteria,1J5D3@118884|unclassified GammaproteobacteriaEcontig4CDS32244027-0
contig4_5KEGGK00014shikimate dehydrogenase [EC:1.1.1.25]contig4CDS32244027-0
contig4_5GOGO:0004764;shikimate 3-dehydrogenase (NADP+) activity;contig4CDS32244027-0
contig4_5IPRSCANIPR013708Shikimate dehydrogenase substrate binding, N-terminalcontig4CDS32244027-0
contig4_5PFAMPF08501Shikimate dehydrogenase substrate binding domaincontig4CDS32244027-0
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