Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig37_12EggNOGCOG1218@1|root,COG1218@2|Bacteria,1N0GY@1224|Proteobacteria,1RP5A@1236|Gammaproteobacteria,1J5ZG@118884|unclassified GammaproteobacteriaPcontig37CDS1743918206-0
contig37_12KEGGK010823'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]contig37CDS1743918206-0
contig37_12IPRSCANIPR000760Inositol monophosphatase-likecontig37CDS1743918206-0
contig37_12PFAMPF00459Inositol monophosphatase familycontig37CDS1743918206-0
contig37_13EggNOGCOG0568@1|root,COG0568@2|Bacteria,1MVNJ@1224|Proteobacteria,1RMQI@1236|Gammaproteobacteria,1J4NF@118884|unclassified GammaproteobacteriaKcontig37CDS1840620220-0
contig37_13KEGGK03086RNA polymerase primary sigma factorcontig37CDS1840620220-0
contig37_13GOGO:0003677;GO:0003700;GO:0006352;GO:0006355;GO:0016987;DNA binding; DNA-binding transcription factor activity; DNA-templated transcription initiation; regulation of DNA-templated transcription; sigma factor activity;contig37CDS1840620220-0
contig37_13IPRSCANIPR007631RNA polymerase sigma factor 70, non-essential domaincontig37CDS1840620220-0
contig37_13PFAMPF04546Sigma-70, non-essential regioncontig37CDS1840620220-0
contig37_14EggNOGCOG0462@1|root,COG0462@2|Bacteria,1MW21@1224|Proteobacteria,1RMUC@1236|GammaproteobacteriaFcontig37CDS2030521267-0
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