Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig36_4KEGGK02518translation initiation factor IF-1contig36CDS25162734+0
contig36_4GOGO:0003723;GO:0003743;GO:0006413;RNA binding; translation initiation factor activity; translational initiation;contig36CDS25162734+0
contig36_4IPRSCANIPR006196RNA-binding domain, S1, IF1 typecontig36CDS25162734+0
contig36_4PFAMPF01176Translation initiation factor 1A / IF-1contig36CDS25162734+0
contig36_5EggNOGCOG3630@1|root,COG3630@2|BacteriaCcontig36CDS29703209+0
contig36_5KEGGK01573oxaloacetate decarboxylase (Na+ extruding) subunit gammacontig36CDS29703209+0
contig36_5GOGO:0015081;GO:0016020;GO:0036376;sodium ion transmembrane transporter activity; membrane; sodium ion export across plasma membrane;contig36CDS29703209+0
contig36_5IPRSCANIPR005899Sodium ion-translocating decarboxylasecontig36CDS29703209+0
contig36_5PFAMPF04277Oxaloacetate decarboxylase, gamma chaincontig36CDS29703209+0
contig36_6EggNOGCOG0511@1|root,COG5016@1|root,COG0511@2|Bacteria,COG5016@2|Bacteria,1QTTG@1224|Proteobacteria,1RNG6@1236|Gammaproteobacteria,1J4MJ@118884|unclassified GammaproteobacteriaCIcontig36CDS32165051+0
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