Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig30_10PFAMPF04383KilA-N domaincontig30CDS86459448-0
contig30_11EggNOGCOG0060@1|root,COG0060@2|Bacteria,1MVBQ@1224|Proteobacteria,1RMTF@1236|Gammaproteobacteria,1J4ES@118884|unclassified GammaproteobacteriaJcontig30CDS944812216-0
contig30_11KEGGK01870isoleucyl-tRNA synthetase [EC:6.1.1.5]contig30CDS944812216-0
contig30_11GOGO:0000166;GO:0004812;GO:0005524;GO:0006418;nucleotide binding; aminoacyl-tRNA ligase activity; ATP binding; tRNA aminoacylation for protein translation;contig30CDS944812216-0
contig30_11IPRSCANIPR002300Aminoacyl-tRNA synthetase, class Iacontig30CDS944812216-0
contig30_11PFAMPF00133tRNA synthetases class I (I, L, M and V)contig30CDS944812216-0
contig30_12KEGGK26223GDP-fucose transportercontig30CDS1245012563-0
contig30_13EggNOGCOG1187@1|root,COG1187@2|Bacteria,1MUCE@1224|Proteobacteria,1RQU0@1236|Gammaproteobacteria,1J4GT@118884|unclassified GammaproteobacteriaJcontig30CDS1265013378-0
contig30_13KEGGK0617823S rRNA pseudouridine2605 synthase [EC:5.4.99.22]contig30CDS1265013378-0
contig30_13GOGO:0001522;GO:0003723;GO:0009451;GO:0009982;pseudouridine synthesis; RNA binding; RNA modification; pseudouridine synthase activity;contig30CDS1265013378-0
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