Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig29_12EggNOGCOG0141@1|root,COG0141@2|Bacteria,1MUUF@1224|Proteobacteria,1RMZD@1236|Gammaproteobacteria,1J59J@118884|unclassified GammaproteobacteriaEcontig29CDS982611118+0
contig29_12KEGGK00013histidinol dehydrogenase [EC:1.1.1.23]contig29CDS982611118+0
contig29_12GOGO:0016616;GO:0046872;GO:0051287;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; metal ion binding; NAD binding;contig29CDS982611118+0
contig29_12IPRSCANIPR012131Histidinol dehydrogenasecontig29CDS982611118+0
contig29_12PFAMPF00815Histidinol dehydrogenasecontig29CDS982611118+0
contig29_13EggNOGCOG0541@1|root,COG0541@2|Bacteria,1MVIA@1224|Proteobacteria,1RMU9@1236|Gammaproteobacteria,1J4KT@118884|unclassified GammaproteobacteriaUcontig29CDS1122012635-0
contig29_13KEGGK03106signal recognition particle subunit SRP54 [EC:3.6.5.4]contig29CDS1122012635-0
contig29_13GOGO:0005525;GO:0006614;GTP binding; SRP-dependent cotranslational protein targeting to membrane;contig29CDS1122012635-0
contig29_13IPRSCANIPR000897Signal recognition particle, SRP54 subunit, GTPase domaincontig29CDS1122012635-0
contig29_13PFAMPF00448SRP54-type protein, GTPase domaincontig29CDS1122012635-0
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