Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig27_20GOGO:0010033;GO:0019867;GO:0061024;response to organic substance; outer membrane; membrane organization;contig27CDS1854320720-0
contig27_20IPRSCANIPR007543LptD, C-terminalcontig27CDS1854320720-0
contig27_20PFAMPF04453LPS transport system Dcontig27CDS1854320720-0
contig27_21EggNOG293CN@1|root,2Z8R1@2|Bacteria,1R8CI@1224|Proteobacteria,1SC7G@1236|Gammaproteobacteria,462CU@72273|Thiotrichales-contig27CDS2088221637-0
contig27_21KEGGK24131protease PrsW [EC:3.4.-.-]contig27CDS2088221637-0
contig27_22EggNOGCOG0607@1|root,COG0607@2|Bacteria,1REHH@1224|Proteobacteria,1S343@1236|Gammaproteobacteria,1WXZR@135613|ChromatialesPcontig27CDS2162222032-0
contig27_22KEGGK03972phage shock protein Econtig27CDS2162222032-0
contig27_22IPRSCANIPR001763Rhodanese-like domaincontig27CDS2162222032-0
contig27_22PFAMPF00581Rhodanese-like domaincontig27CDS2162222032-0
contig27_23EggNOGCOG0454@1|root,COG0456@2|Bacteria,1N7JM@1224|Proteobacteria,2VU1F@28216|Betaproteobacteria,3T4P7@506|AlcaligenaceaeKcontig27CDS2201622285-0
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