Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig107_8KEGGK02899large subunit ribosomal protein L27contig107CDS57606017+0
contig107_8GOGO:0003735;GO:0005840;GO:0006412;structural constituent of ribosome; ribosome; translation;contig107CDS57606017+0
contig107_8IPRSCANIPR001684Large ribosomal subunit protein bL27contig107CDS57606017+0
contig107_8PFAMPF01016Ribosomal L27 proteincontig107CDS57606017+0
contig108_1EggNOGCOG0037@1|root,COG0037@2|Bacteria,1MU85@1224|Proteobacteria,1RN14@1236|Gammaproteobacteria,1J5PD@118884|unclassified GammaproteobacteriaDcontig108CDS1051283-0
contig108_1KEGGK04075tRNA(Ile)-lysidine synthase [EC:6.3.4.19]contig108CDS1051283-0
contig108_1IPRSCANIPR011063tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminalcontig108CDS1051283-0
contig108_1PFAMPF01171PP-loop familycontig108CDS1051283-0
contig108_10EggNOG2AVJN@1|root,31MCB@2|Bacteria,1QJ7C@1224|Proteobacteria,1TH51@1236|Gammaproteobacteria,1Y04M@135623|Vibrionales-contig108CDS68577162+0
contig108_11EggNOGCOG0162@1|root,COG0162@2|Bacteria,1MVUQ@1224|Proteobacteria,1RPKC@1236|Gammaproteobacteria,1J4U5@118884|unclassified GammaproteobacteriaJcontig108CDS77508934-0
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