Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig21_6IPRSCANIPR002180Lumazine/riboflavin synthasecontig21CDS51305645+0
contig21_6PFAMPF008856,7-dimethyl-8-ribityllumazine synthasecontig21CDS51305645+0
contig21_60EggNOGCOG0298@1|root,COG0298@2|Bacteria,1N76Y@1224|Proteobacteria,1T0H0@1236|Gammaproteobacteria,461BU@72273|ThiotrichalesOcontig21CDS6005260333-0
contig21_60KEGGK04653hydrogenase expression/formation protein HypCcontig21CDS6005260333-0
contig21_60IPRSCANIPR001109Hydrogenase expression/formation protein, HupF/HypCcontig21CDS6005260333-0
contig21_60PFAMPF01455HupF/HypC familycontig21CDS6005260333-0
contig21_61EggNOGCOG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,2TQPG@28211|Alphaproteobacteria,36XRS@31993|MethylocystaceaeTcontig21CDS6033661580-0
contig21_61KEGGK19641two-component system, NtrC family, response regulator HupR/HoxAcontig21CDS6033661580-0
contig21_61GOGO:0005524;GO:0006355;GO:0008134;ATP binding; regulation of DNA-templated transcription; transcription factor binding;contig21CDS6033661580-0
contig21_61IPRSCANIPR002078RNA polymerase sigma factor 54 interaction domaincontig21CDS6033661580-0
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