Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

<< First 265 266 267 268 269 270 271 272 273 274 Forward> Last>>        636 pages in total

GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig21_35IPRSCANIPR007016O-antigen ligase-relatedcontig21CDS3210734071+0
contig21_35PFAMPF04932O-Antigen ligasecontig21CDS3210734071+0
contig21_36EggNOGCOG2609@1|root,COG2609@2|Bacteria,1MV21@1224|Proteobacteria,1RN6K@1236|Gammaproteobacteria,1J56P@118884|unclassified GammaproteobacteriaCcontig21CDS3414736795+0
contig21_36KEGGK00163pyruvate dehydrogenase E1 component [EC:1.2.4.1]contig21CDS3414736795+0
contig21_36IPRSCANIPR041621Pyruvate dehydrogenase E1 component, middle domaincontig21CDS3414736795+0
contig21_36PFAMPF17831Pyruvate dehydrogenase E1 component middle domaincontig21CDS3414736795+0
contig21_37EggNOG2C9B9@1|root,32RP0@2|Bacteria,1MZKM@1224|Proteobacteria,1S8UZ@1236|Gammaproteobacteria,1XKNC@135619|OceanospirillalesScontig21CDS3682737171+0
contig21_37KEGGK150653-O-methylgallate 3,4-dioxygenase [EC:1.13.11.-]contig21CDS3682737171+0
contig21_37IPRSCANIPR014984HopJ type III effector proteincontig21CDS3682737171+0
contig21_37PFAMPF08888HopJ type III effector proteincontig21CDS3682737171+0
TOP