Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig21_21IPRSCANIPR007492LytTR DNA-binding domaincontig21CDS2013620879+0
contig21_21PFAMPF04397LytTr DNA-binding domaincontig21CDS2013620879+0
contig21_22KEGGK22110oligogalacturonate-specific porin family proteincontig21CDS2086622020-0
contig21_23EggNOGCOG2834@1|root,COG2834@2|Bacteria,1RE9C@1224|Proteobacteria,1S5KX@1236|Gammaproteobacteria,2Q4KF@267888|PseudoalteromonadaceaeMcontig21CDS2202022709-0
contig21_23IPRSCANIPR033399Putative outer membrane lipoprotein-sorting proteincontig21CDS2202022709-0
contig21_23PFAMPF17131Outer membrane lipoprotein-sorting proteincontig21CDS2202022709-0
contig21_24EggNOGCOG4591@1|root,COG4591@2|Bacteria,1R4Q2@1224|Proteobacteria,2VK8T@28216|Betaproteobacteria,4AI35@80864|ComamonadaceaeMcontig21CDS2270223943-0
contig21_24KEGGK09808lipoprotein-releasing system permease proteincontig21CDS2270223943-0
contig21_24GOGO:0016020;membrane;contig21CDS2270223943-0
contig21_24IPRSCANIPR003838ABC3 transporter permease protein domaincontig21CDS2270223943-0
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