Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig21_2IPRSCANIPR003439ABC transporter-like, ATP-binding domaincontig21CDS9952584+0
contig21_2PFAMPF00005ABC transportercontig21CDS9952584+0
contig21_20EggNOGCOG0422@1|root,COG0422@2|Bacteria,1MUVV@1224|Proteobacteria,1RP1F@1236|Gammaproteobacteria,1J51V@118884|unclassified GammaproteobacteriaHcontig21CDS1824720112+0
contig21_20KEGGK03147phosphomethylpyrimidine synthase [EC:4.1.99.17]contig21CDS1824720112+0
contig21_20GOGO:0009228;GO:0051536;thiamine biosynthetic process; iron-sulfur cluster binding;contig21CDS1824720112+0
contig21_20IPRSCANIPR002817Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/Bcontig21CDS1824720112+0
contig21_20PFAMPF01964Radical SAM ThiC familycontig21CDS1824720112+0
contig21_21EggNOGCOG3279@1|root,COG3279@2|Bacteria,1RCM1@1224|Proteobacteria,1S3B5@1236|Gammaproteobacteria,1XSMA@135623|VibrionalesKcontig21CDS2013620879+0
contig21_21KEGGK02477two-component system, LytTR family, response regulatorcontig21CDS2013620879+0
contig21_21GOGO:0003677;DNA binding;contig21CDS2013620879+0
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