Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig107_12EggNOGCOG1331@1|root,COG1331@2|Bacteria,1MUUT@1224|Proteobacteria,1RSQQ@1236|Gammaproteobacteria,1J9D0@118884|unclassified GammaproteobacteriaOcontig107CDS852510729-0
contig107_12CAZyULQ52457.1GH9contig107CDS852510729-0
contig107_12KEGGK06888uncharacterized proteincontig107CDS852510729-0
contig107_12IPRSCANIPR004879Domain of unknown function DUF255contig107CDS852510729-0
contig107_12PFAMPF03190Protein of unknown function, DUF255contig107CDS852510729-0
contig107_14EggNOGCOG1595@1|root,COG1595@2|Bacteria,1N00E@1224|Proteobacteria,1S90I@1236|Gammaproteobacteria,1XKD4@135619|OceanospirillalesKcontig107CDS1121111744-0
contig107_14KEGGK03088RNA polymerase sigma-70 factor, ECF subfamilycontig107CDS1121111744-0
contig107_14GOGO:0003700;GO:0006352;GO:0006355;DNA-binding transcription factor activity; DNA-templated transcription initiation; regulation of DNA-templated transcription;contig107CDS1121111744-0
contig107_14IPRSCANIPR007627RNA polymerase sigma-70 region 2contig107CDS1121111744-0
contig107_14PFAMPF04542Sigma-70 region 2contig107CDS1121111744-0
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