Symbiotic Microorganism Data

Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics

Species	Host	Genome Size	Contig Count	Protein Count	GC Percentage	CheckM Completeness	CheckM Contamination	CheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacterium	Chrysomallon squamiferum	1,672,431	171	-	39.65	98.54	0.883	-

NCBI Metadata

Assembly Level	Assembly ID	GenBank ID	Bioproject	Biosample	Genome Category	NCBI Taxon ID	Isolation Source
Contig	PRJNA764822.B3	-	PRJNA764822	-	MAG	1913989	-

Gene Information

<< First 238 239 240 241 242 243 244 245 246 247 Forward> Last>> 636 pages in total

Gene	Database	Annotation ID	Description	Contigs	Type	Start	end	Strand	Partial
contig20_29	PFAM	PF07603	Protein of unknown function (DUF1566)	contig20	CDS	28892	29443	-	0
contig20_3	EggNOG	COG0129@1\|root,COG0129@2\|Bacteria,1MUTQ@1224\|Proteobacteria,1RMP2@1236\|Gammaproteobacteria,1J8GI@118884\|unclassified Gammaproteobacteria	H	contig20	CDS	790	2454	+	0
contig20_3	CAZy	WAO96723.1	GH0	contig20	CDS	790	2454	+	0
contig20_3	KEGG	K01687	dihydroxy-acid dehydratase [EC:4.2.1.9]	contig20	CDS	790	2454	+	0
contig20_3	GO	GO:0016836;	hydro-lyase activity;	contig20	CDS	790	2454	+	0
contig20_3	IPRSCAN	IPR000581	Dihydroxy-acid/6-phosphogluconate dehydratase	contig20	CDS	790	2454	+	0
contig20_3	PFAM	PF00920	Dehydratase family	contig20	CDS	790	2454	+	0
contig20_30	EggNOG	COG0665@1\|root,COG0665@2\|Bacteria,1MVIZ@1224\|Proteobacteria,1RQ50@1236\|Gammaproteobacteria	E	contig20	CDS	29433	30422	-	0
contig20_30	KEGG	K03153	glycine oxidase [EC:1.4.3.19]	contig20	CDS	29433	30422	-	0
contig20_30	GO	GO:0016491;	oxidoreductase activity;	contig20	CDS	29433	30422	-	0

TOP

Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.