Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig20_16PFAMPF04362Bacterial Fe(2+) traffickingcontig20CDS1724817517+0
contig20_17EggNOGCOG0194@1|root,COG0194@2|Bacteria,1MW92@1224|Proteobacteria,1RN09@1236|Gammaproteobacteria,1J5P4@118884|unclassified GammaproteobacteriaFcontig20CDS1751718122+0
contig20_17KEGGK00942guanylate kinase [EC:2.7.4.8]contig20CDS1751718122+0
contig20_17IPRSCANIPR008145Guanylate kinase/L-type calcium channel beta subunitcontig20CDS1751718122+0
contig20_17PFAMPF00625Guanylate kinasecontig20CDS1751718122+0
contig20_18EggNOGCOG0568@1|root,COG0568@2|Bacteria,1MVWR@1224|Proteobacteria,1RMFR@1236|Gammaproteobacteria,1J4RB@118884|unclassified GammaproteobacteriaKcontig20CDS1816919011+0
contig20_18KEGGK03089RNA polymerase sigma-32 factorcontig20CDS1816919011+0
contig20_18GOGO:0003700;GO:0006352;GO:0006355;DNA-binding transcription factor activity; DNA-templated transcription initiation; regulation of DNA-templated transcription;contig20CDS1816919011+0
contig20_18IPRSCANIPR007627RNA polymerase sigma-70 region 2contig20CDS1816919011+0
contig20_18PFAMPF04542Sigma-70 region 2contig20CDS1816919011+0
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