Symbiotic Microorganism Data

Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics

Species	Host	Genome Size	Contig Count	Protein Count	GC Percentage	CheckM Completeness	CheckM Contamination	CheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacterium	Chrysomallon squamiferum	1,672,431	171	-	39.65	98.54	0.883	-

NCBI Metadata

Assembly Level	Assembly ID	GenBank ID	Bioproject	Biosample	Genome Category	NCBI Taxon ID	Isolation Source
Contig	PRJNA764822.B3	-	PRJNA764822	-	MAG	1913989	-

Gene Information

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Gene	Database	Annotation ID	Description	Contigs	Type	Start	end	Strand	Partial
contig103_4	IPRSCAN	IPR000994	Peptidase M24	contig103	CDS	3637	4413	-	0
contig103_4	PFAM	PF00557	Metallopeptidase family M24	contig103	CDS	3637	4413	-	0
contig103_5	EggNOG	COG0501@1\|root,COG0501@2\|Bacteria,1PQX0@1224\|Proteobacteria,1RXB3@1236\|Gammaproteobacteria,2Q8EJ@267889\|Colwelliaceae	O	contig103	CDS	4417	5307	-	0
contig103_5	KEGG	K03799	heat shock protein HtpX [EC:3.4.24.-]	contig103	CDS	4417	5307	-	0
contig103_5	GO	GO:0004222;GO:0006508;	metalloendopeptidase activity; proteolysis;	contig103	CDS	4417	5307	-	0
contig103_5	IPRSCAN	IPR001915	Peptidase M48	contig103	CDS	4417	5307	-	0
contig103_5	PFAM	PF01435	Peptidase family M48	contig103	CDS	4417	5307	-	0
contig103_6	EggNOG	2BXMY@1\|root,2Z8Y9@2\|Bacteria,1Q2YR@1224\|Proteobacteria	-	contig103	CDS	5611	6636	+	0
contig103_6	KEGG	K07090	uncharacterized protein	contig103	CDS	5611	6636	+	0
contig103_7	EggNOG	COG3258@1\|root,COG3258@2\|Bacteria,1QW7R@1224\|Proteobacteria,2U26W@28211\|Alphaproteobacteria	C	contig103	CDS	6712	7863	+	0

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Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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