Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig137_22KEGGK00974tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]contig137CDS2480025915-0
contig137_22GOGO:0003723;GO:0006396;GO:0016779;RNA binding; RNA processing; nucleotidyltransferase activity;contig137CDS2480025915-0
contig137_22IPRSCANIPR002646Poly A polymerase, head domaincontig137CDS2480025915-0
contig137_22PFAMPF01743Poly A polymerase head domaincontig137CDS2480025915-0
contig137_23EggNOGCOG0773@1|root,COG0773@2|Bacteria,1MUC5@1224|Proteobacteria,1RMMT@1236|Gammaproteobacteria,2PMR1@256005|Alteromonadales genera incertae sedisMcontig137CDS2621527531+0
contig137_23KEGGK02558UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]contig137CDS2621527531+0
contig137_23GOGO:0005524;GO:0009058;GO:0016881;ATP binding; biosynthetic process; acid-amino acid ligase activity;contig137CDS2621527531+0
contig137_23IPRSCANIPR013221Mur ligase, centralcontig137CDS2621527531+0
contig137_23PFAMPF08245Mur ligase middle domaincontig137CDS2621527531+0
contig137_24EggNOGCOG0163@1|root,COG0163@2|Bacteria,1RA0P@1224|Proteobacteria,2VIWQ@28216|Betaproteobacteria,1KRSY@119069|HydrogenophilalesHcontig137CDS2752828127+0
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