Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig103_19PFAMPF00155Aminotransferase class I and IIcontig103CDS1885020025-0
contig103_2EggNOGCOG0173@1|root,COG0173@2|Bacteria,1MUXB@1224|Proteobacteria,1RNMI@1236|Gammaproteobacteria,1J5H2@118884|unclassified GammaproteobacteriaJcontig103CDS12152966-0
contig103_2CAZyALR08738.2GT83contig103CDS12152966-0
contig103_2KEGGK01876aspartyl-tRNA synthetase [EC:6.1.1.12]contig103CDS12152966-0
contig103_2GOGO:0000166;GO:0004812;GO:0005524;GO:0006418;nucleotide binding; aminoacyl-tRNA ligase activity; ATP binding; tRNA aminoacylation for protein translation;contig103CDS12152966-0
contig103_2IPRSCANIPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)contig103CDS12152966-0
contig103_2PFAMPF00152tRNA synthetases class II (D, K and N)contig103CDS12152966-0
contig103_20EggNOGCOG0556@1|root,COG0556@2|Bacteria,1MUFK@1224|Proteobacteria,1RN6Z@1236|Gammaproteobacteria,1J517@118884|unclassified GammaproteobacteriaLcontig103CDS2005222079+0
contig103_20KEGGK03702excinuclease ABC subunit Bcontig103CDS2005222079+0
contig103_20IPRSCANIPR041471UvrB, interaction domaincontig103CDS2005222079+0
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