Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig126_27KEGGK02986small subunit ribosomal protein S4contig126CDS1164412270+0
contig126_27GOGO:0019843;rRNA binding;contig126CDS1164412270+0
contig126_27IPRSCANIPR001912Small ribosomal subunit protein uS4, N-terminalcontig126CDS1164412270+0
contig126_27PFAMPF00163Ribosomal protein S4/S9 N-terminal domaincontig126CDS1164412270+0
contig126_28EggNOGCOG0202@1|root,COG0202@2|Bacteria,1MU75@1224|Proteobacteria,1RMU3@1236|Gammaproteobacteria,1J4UB@118884|unclassified GammaproteobacteriaKcontig126CDS1228213262+0
contig126_28KEGGK03040DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]contig126CDS1228213262+0
contig126_28GOGO:0003899;GO:0006351;GO:0046983;DNA-directed 5'-3' RNA polymerase activity; DNA-templated transcription; protein dimerization activity;contig126CDS1228213262+0
contig126_28IPRSCANIPR011262DNA-directed RNA polymerase, insert domaincontig126CDS1228213262+0
contig126_28PFAMPF01000RNA polymerase Rpb3/RpoA insert domaincontig126CDS1228213262+0
contig126_29EggNOGCOG0203@1|root,COG0203@2|Bacteria,1RCWN@1224|Proteobacteria,1S3QK@1236|Gammaproteobacteria,1J60B@118884|unclassified GammaproteobacteriaJcontig126CDS1327213667+0
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