Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig125_21EggNOGCOG1376@1|root,COG1376@2|Bacteria,1RHBG@1224|Proteobacteria,1S6DY@1236|Gammaproteobacteria,3NN3W@468|MoraxellaceaeScontig125CDS1577016216-0
contig125_21KEGGK16291L,D-transpeptidase ErfK/SrfKcontig125CDS1577016216-0
contig125_21GOGO:0016740;transferase activity;contig125CDS1577016216-0
contig125_21IPRSCANIPR005490L,D-transpeptidase catalytic domaincontig125CDS1577016216-0
contig125_21PFAMPF03734L,D-transpeptidase catalytic domaincontig125CDS1577016216-0
contig125_22EggNOGCOG2265@1|root,COG2265@2|Bacteria,1MV3A@1224|Proteobacteria,1RN1D@1236|Gammaproteobacteria,1J5T0@118884|unclassified GammaproteobacteriaJcontig125CDS1622617542-0
contig125_22KEGGK0321523S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]contig125CDS1622617542-0
contig125_22GOGO:0006396;GO:0008173;RNA processing; RNA methyltransferase activity;contig125CDS1622617542-0
contig125_22IPRSCANIPR010280(Uracil-5)-methyltransferase familycontig125CDS1622617542-0
contig125_22PFAMPF05958tRNA (Uracil-5-)-methyltransferasecontig125CDS1622617542-0
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