Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig786_1EggNOGCOG1506@1|root,COG1506@2|Bacteria,1QXBZ@1224|Proteobacteria,2U1IT@28211|AlphaproteobacteriaEcontig786CDS3530+10
contig786_1KEGGK06999phospholipase/carboxylesterasecontig786CDS3530+10
contig786_2EggNOGCOG3284@1|root,COG3284@2|Bacteria,1NRG5@1224|Proteobacteria,2TR0H@28211|Alphaproteobacteria,3JS68@41294|BradyrhizobiaceaeKQcontig786CDS6821872+1
contig786_2KEGGK21405sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoRcontig786CDS6821872+1
contig786_2GOGO:0005524;GO:0006355;GO:0008134;ATP binding; regulation of DNA-templated transcription; transcription factor binding;contig786CDS6821872+1
contig786_2IPRSCANIPR002078RNA polymerase sigma factor 54 interaction domaincontig786CDS6821872+1
contig786_2PFAMPF00158Sigma-54 interaction domaincontig786CDS6821872+1
contig787_1EggNOGCOG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,43ITA@69277|PhyllobacteriaceaeVcontig787CDS21891+10
contig787_1KEGGK18142multidrug efflux pumpcontig787CDS21891+10
contig787_1GOGO:0016020;GO:0022857;GO:0055085;membrane; transmembrane transporter activity; transmembrane transport;contig787CDS21891+10
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