Symbiotic Microorganism Data

Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics

Species	Host	Genome Size	Contig Count	Protein Count	GC Percentage	CheckM Completeness	CheckM Contamination	CheckM Strain Heterogeneity
uncultured Phyllobacterium sp.	Chrysomallon squamiferum	2,659,846	963	-	59.47	56.28	1.231	-

NCBI Metadata

Assembly Level	Assembly ID	GenBank ID	Bioproject	Biosample	Genome Category	NCBI Taxon ID	Isolation Source
Contig	PRJNA764822.B1	-	PRJNA764822	-	MAG	1871046	-

Gene Information

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Gene	Database	Annotation ID	Description	Contigs	Type	Start	end	Strand	Partial
contig778_3	IPRSCAN	IPR015358	Transcription regulator MerR, DNA binding	contig778	CDS	674	1069	-	0
contig778_3	PFAM	PF09278	MerR, DNA binding	contig778	CDS	674	1069	-	0
contig778_4	EggNOG	COG2217@1\|root,COG2217@2\|Bacteria,1MU08@1224\|Proteobacteria,2TR80@28211\|Alphaproteobacteria,43HNC@69277\|Phyllobacteriaceae	P	contig778	CDS	1077	2741	-	1
contig778_4	CAZy	QBQ55156.1	CBM50	contig778	CDS	1077	2741	-	1
contig778_4	KEGG	K23254	P-type Ag+ transporter [EC:7.2.2.15]	contig778	CDS	1077	2741	-	1
contig778_4	IPRSCAN	-	-	contig778	CDS	1077	2741	-	1
contig778_4	PFAM	PF00122	E1-E2 ATPase	contig778	CDS	1077	2741	-	1
contig779_1	EggNOG	COG0841@1\|root,COG0841@2\|Bacteria,1MU48@1224\|Proteobacteria,2TQT0@28211\|Alphaproteobacteria,43H5D@69277\|Phyllobacteriaceae	V	contig779	CDS	2	1816	-	11
contig779_1	KEGG	K07789	multidrug efflux pump	contig779	CDS	2	1816	-	11
contig779_1	GO	GO:0016020;GO:0022857;GO:0055085;	membrane; transmembrane transporter activity; transmembrane transport;	contig779	CDS	2	1816	-	11

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Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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