Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig735_2EggNOGCOG1595@1|root,COG1595@2|Bacteria,1RKMN@1224|Proteobacteria,2U9GS@28211|Alphaproteobacteria,4BDTH@82115|RhizobiaceaeKcontig735CDS337921+0
contig735_2KEGGK03088RNA polymerase sigma-70 factor, ECF subfamilycontig735CDS337921+0
contig735_2GOGO:0003700;GO:0006352;GO:0006355;DNA-binding transcription factor activity; DNA-templated transcription initiation; regulation of DNA-templated transcription;contig735CDS337921+0
contig735_2IPRSCANIPR007627RNA polymerase sigma-70 region 2contig735CDS337921+0
contig735_2PFAMPF04542Sigma-70 region 2contig735CDS337921+0
contig735_3EggNOGCOG2304@1|root,COG2304@2|Bacteria,1MUTS@1224|Proteobacteria,2TSQU@28211|Alphaproteobacteria,43H33@69277|PhyllobacteriaceaeScontig735CDS9232926+0
contig735_3KEGGK07114Ca-activated chloride channel homologcontig735CDS9232926+0
contig735_3IPRSCANIPR021908Uncharacterized protein YfbK, C-terminalcontig735CDS9232926+0
contig735_3PFAMPF12034Uncharacterized protein YfbK, C-terminalcontig735CDS9232926+0
contig736_1EggNOGCOG1092@1|root,COG1092@2|Bacteria,1QSD4@1224|Proteobacteria,2TUFT@28211|Alphaproteobacteria,43H52@69277|PhyllobacteriaceaeJcontig736CDS3854-10
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