Symbiotic Microorganism Data

Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics

Species	Host	Genome Size	Contig Count	Protein Count	GC Percentage	CheckM Completeness	CheckM Contamination	CheckM Strain Heterogeneity
uncultured Phyllobacterium sp.	Chrysomallon squamiferum	2,659,846	963	-	59.47	56.28	1.231	-

NCBI Metadata

Assembly Level	Assembly ID	GenBank ID	Bioproject	Biosample	Genome Category	NCBI Taxon ID	Isolation Source
Contig	PRJNA764822.B1	-	PRJNA764822	-	MAG	1871046	-

Gene Information

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Gene	Database	Annotation ID	Description	Contigs	Type	Start	end	Strand	Partial
contig709_5	GO	GO:0006364;GO:0008168;	rRNA processing; methyltransferase activity;	contig709	CDS	2741	3223	-	0
contig709_5	IPRSCAN	IPR003742	RNA methyltransferase RlmH	contig709	CDS	2741	3223	-	0
contig709_5	PFAM	PF02590	Predicted SPOUT methyltransferase	contig709	CDS	2741	3223	-	0
contig709_6	EggNOG	COG0799@1\|root,COG0799@2\|Bacteria,1MZEF@1224\|Proteobacteria,2UBSV@28211\|Alphaproteobacteria,43K1M@69277\|Phyllobacteriaceae	J	contig709	CDS	3392	3799	-	1
contig709_6	KEGG	K09710	ribosome-associated protein	contig709	CDS	3392	3799	-	1
contig709_6	IPRSCAN	-	-	contig709	CDS	3392	3799	-	1
contig709_6	PFAM	PF02410	Ribosomal silencing factor during starvation	contig709	CDS	3392	3799	-	1
contig71_1	EggNOG	COG5342@1\|root,COG5342@2\|Bacteria,1MV8Y@1224\|Proteobacteria,2TS6A@28211\|Alphaproteobacteria,43II8@69277\|Phyllobacteriaceae	S	contig71	CDS	3	593	+	10
contig71_1	KEGG	K06142	outer membrane protein	contig71	CDS	3	593	+	10
contig71_1	IPRSCAN	IPR010642	Invasion protein B	contig71	CDS	3	593	+	10

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Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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