Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig709_2IPRSCANIPR005119LysR, substrate-bindingcontig709CDS13071972+0
contig709_2PFAMPF03466LysR substrate binding domaincontig709CDS13071972+0
contig709_3EggNOGCOG0583@1|root,COG0583@2|Bacteria,1MWVB@1224|Proteobacteria,2TQXV@28211|Alphaproteobacteria,43HQ5@69277|PhyllobacteriaceaeKcontig709CDS19762188+0
contig709_3KEGGK03566LysR family transcriptional regulator, glycine cleavage system transcriptional activatorcontig709CDS19762188+0
contig709_4EggNOG2DE5Q@1|root,2ZKM4@2|Bacteria,1RCVX@1224|Proteobacteria,2U6G7@28211|Alphaproteobacteria,43MK8@69277|PhyllobacteriaceaeScontig709CDS23042684+0
contig709_4KEGGK27103serrate RNA effector moleculecontig709CDS23042684+0
contig709_4IPRSCANIPR021381Protein of unknown function DUF3011contig709CDS23042684+0
contig709_4PFAMPF11218Protein of unknown function (DUF3011)contig709CDS23042684+0
contig709_5EggNOGCOG1576@1|root,COG1576@2|Bacteria,1R9Z2@1224|Proteobacteria,2U95Q@28211|Alphaproteobacteria,43JWM@69277|PhyllobacteriaceaeJcontig709CDS27413223-0
contig709_5KEGGK0078323S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]contig709CDS27413223-0
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