Symbiotic Microorganism Data

Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics

Species	Host	Genome Size	Contig Count	Protein Count	GC Percentage	CheckM Completeness	CheckM Contamination	CheckM Strain Heterogeneity
uncultured Phyllobacterium sp.	Chrysomallon squamiferum	2,659,846	963	-	59.47	56.28	1.231	-

NCBI Metadata

Assembly Level	Assembly ID	GenBank ID	Bioproject	Biosample	Genome Category	NCBI Taxon ID	Isolation Source
Contig	PRJNA764822.B1	-	PRJNA764822	-	MAG	1871046	-

Gene Information

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Gene	Database	Annotation ID	Description	Contigs	Type	Start	end	Strand	Partial
contig678_1	KEGG	K02230	cobaltochelatase CobN [EC:6.6.1.2]	contig678	CDS	3	1751	-	11
contig678_1	GO	GO:0009058;	biosynthetic process;	contig678	CDS	3	1751	-	11
contig678_1	IPRSCAN	IPR003672	CobN/magnesium chelatase	contig678	CDS	3	1751	-	11
contig678_1	PFAM	PF02514	CobN/Magnesium Chelatase	contig678	CDS	3	1751	-	11
contig679_1	EggNOG	COG0491@1\|root,COG0491@2\|Bacteria,1NGQE@1224\|Proteobacteria,2TUZS@28211\|Alphaproteobacteria,4BBFE@82115\|Rhizobiaceae	S	contig679	CDS	3	872	-	10
contig679_1	KEGG	K05555	cyclase [EC:4.-.-.-]	contig679	CDS	3	872	-	10
contig679_2	EggNOG	COG0583@1\|root,COG0583@2\|Bacteria,1QY35@1224\|Proteobacteria,2U0DM@28211\|Alphaproteobacteria,4BAV8@82115\|Rhizobiaceae	K	contig679	CDS	989	1888	+	0
contig679_2	KEGG	K18900	LysR family transcriptional regulator, regulator for bpeEF and oprC	contig679	CDS	989	1888	+	0
contig679_2	IPRSCAN	IPR005119	LysR, substrate-binding	contig679	CDS	989	1888	+	0
contig679_2	PFAM	PF03466	LysR substrate binding domain	contig679	CDS	989	1888	+	0

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Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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