Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig668_1KEGGK02002glycine betaine/proline transport system substrate-binding proteincontig668CDS2451186+0
contig668_1GOGO:0022857;GO:0043190;GO:0055085;transmembrane transporter activity; ATP-binding cassette (ABC) transporter complex; transmembrane transport;contig668CDS2451186+0
contig668_1IPRSCANIPR007210ABC-type glycine betaine transport system, substrate-binding domaincontig668CDS2451186+0
contig668_1PFAMPF04069Substrate binding domain of ABC-type glycine betaine transport systemcontig668CDS2451186+0
contig668_2EggNOGCOG4176@1|root,COG4176@2|Bacteria,1QTTE@1224|Proteobacteria,2TS3U@28211|Alphaproteobacteria,43RI5@69277|PhyllobacteriaceaeEcontig668CDS12662108+0
contig668_2KEGGK02001glycine betaine/proline transport system permease proteincontig668CDS12662108+0
contig668_2GOGO:0016020;GO:0055085;membrane; transmembrane transport;contig668CDS12662108+0
contig668_2IPRSCANIPR000515ABC transporter type 1, transmembrane domain MetI-likecontig668CDS12662108+0
contig668_2PFAMPF00528Binding-protein-dependent transport system inner membrane componentcontig668CDS12662108+0
contig668_3EggNOGCOG4175@1|root,COG4175@2|Bacteria,1MU86@1224|Proteobacteria,2TS8Y@28211|Alphaproteobacteria,43HAA@69277|PhyllobacteriaceaeEcontig668CDS21052428+1
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