Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig579_2GOGO:0016787;hydrolase activity;contig579CDS7681955+0
contig579_2IPRSCANIPR002933Peptidase M20contig579CDS7681955+0
contig579_2PFAMPF01546Peptidase family M20/M25/M40contig579CDS7681955+0
contig579_3EggNOG2EQXB@1|root,33IH3@2|Bacteria,1NJMU@1224|Proteobacteria,2UMNQ@28211|Alphaproteobacteria,43JUA@69277|Phyllobacteriaceae-contig579CDS19622573+0
contig579_3KEGGK20950polysaccharide biosynthesis protein VpsQcontig579CDS19622573+0
contig579_4EggNOGCOG0101@1|root,COG0101@2|Bacteria,1MUYI@1224|Proteobacteria,2TR57@28211|Alphaproteobacteria,43HTV@69277|PhyllobacteriaceaeJcontig579CDS25252737-1
contig579_4KEGGK06173tRNA pseudouridine38-40 synthase [EC:5.4.99.12]contig579CDS25252737-1
contig579_4GOGO:0001522;GO:0003723;GO:0009451;GO:0009982;pseudouridine synthesis; RNA binding; RNA modification; pseudouridine synthase activity;contig579CDS25252737-1
contig579_4IPRSCANIPR020097Pseudouridine synthase I, TruA, alpha/beta domaincontig579CDS25252737-1
contig579_4PFAMPF01416tRNA pseudouridine synthasecontig579CDS25252737-1
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