Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig546_3IPRSCANIPR003824Undecaprenyl-diphosphatase UppPcontig546CDS12332018-0
contig546_3PFAMPF02673Bacitracin resistance protein BacAcontig546CDS12332018-0
contig546_4EggNOGCOG2365@1|root,COG2365@2|Bacteria,1RJ2P@1224|Proteobacteria,2UB4E@28211|Alphaproteobacteria,43KNE@69277|PhyllobacteriaceaeTcontig546CDS20422236-1
contig547_1EggNOGCOG1595@1|root,COG1595@2|Bacteria,1N4KU@1224|Proteobacteria,2UETT@28211|Alphaproteobacteria,4BHZ1@82115|RhizobiaceaeKcontig547CDS3314+10
contig547_1KEGGK23514RNA polymerase sigma-19 factor, ECF subfamilycontig547CDS3314+10
contig547_1GOGO:0003677;GO:0003700;GO:0006352;GO:0006355;GO:0016987;DNA binding; DNA-binding transcription factor activity; DNA-templated transcription initiation; regulation of DNA-templated transcription; sigma factor activity;contig547CDS3314+10
contig547_1IPRSCANIPR013249RNA polymerase sigma factor 70, region 4 type 2contig547CDS3314+10
contig547_1PFAMPF08281Sigma-70, region 4contig547CDS3314+10
contig547_2EggNOGCOG0609@1|root,COG0609@2|Bacteria,1MVA3@1224|Proteobacteria,2TTI1@28211|Alphaproteobacteria,43GTU@69277|PhyllobacteriaceaePcontig547CDS3011539-1
contig547_2KEGGK23228ferric hydroxamate transport system permease proteincontig547CDS3011539-1
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