Symbiotic Microorganism Data

Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics

Species	Host	Genome Size	Contig Count	Protein Count	GC Percentage	CheckM Completeness	CheckM Contamination	CheckM Strain Heterogeneity
uncultured Phyllobacterium sp.	Chrysomallon squamiferum	2,659,846	963	-	59.47	56.28	1.231	-

NCBI Metadata

Assembly Level	Assembly ID	GenBank ID	Bioproject	Biosample	Genome Category	NCBI Taxon ID	Isolation Source
Contig	PRJNA764822.B1	-	PRJNA764822	-	MAG	1871046	-

Gene Information

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Gene	Database	Annotation ID	Description	Contigs	Type	Start	end	Strand	Partial
contig488_1	KEGG	K00525	ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]	contig488	CDS	1	2718	+	11
contig488_1	IPRSCAN	IPR000788	Ribonucleotide reductase large subunit, C-terminal	contig488	CDS	1	2718	+	11
contig488_1	PFAM	PF02867	Ribonucleotide reductase, barrel domain	contig488	CDS	1	2718	+	11
contig489_1	EggNOG	COG0729@1\|root,COG0729@2\|Bacteria,1MUKM@1224\|Proteobacteria,2TRWD@28211\|Alphaproteobacteria,43H99@69277\|Phyllobacteriaceae	M	contig489	CDS	3	782	+	10
contig489_1	KEGG	K07278	translocation and assembly module TamA	contig489	CDS	3	782	+	10
contig489_1	GO	GO:0019867;	outer membrane;	contig489	CDS	3	782	+	10
contig489_1	IPRSCAN	IPR000184	Bacterial surface antigen (D15)	contig489	CDS	3	782	+	10
contig489_1	PFAM	PF01103	Omp85 superfamily domain	contig489	CDS	3	782	+	10
contig489_2	EggNOG	COG2911@1\|root,COG2911@2\|Bacteria,1MUVD@1224\|Proteobacteria,2TR45@28211\|Alphaproteobacteria,43HWN@69277\|Phyllobacteriaceae	S	contig489	CDS	779	2263	+	1
contig489_2	KEGG	K09800	translocation and assembly module TamB	contig489	CDS	779	2263	+	1

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Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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