Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig477_7PFAMPF02653Branched-chain amino acid transport system / permease componentcontig477CDS56226605+0
contig477_8EggNOGCOG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,2TQKQ@28211|Alphaproteobacteria,43I61@69277|PhyllobacteriaceaeEcontig477CDS66077440+1
contig477_8KEGGK00108choline dehydrogenase [EC:1.1.99.1]contig477CDS66077440+1
contig477_8GOGO:0016614;GO:0050660;oxidoreductase activity, acting on CH-OH group of donors; flavin adenine dinucleotide binding;contig477CDS66077440+1
contig477_8IPRSCANIPR000172Glucose-methanol-choline oxidoreductase, N-terminalcontig477CDS66077440+1
contig477_8PFAMPF00732GMC oxidoreductasecontig477CDS66077440+1
contig478_1EggNOGCOG1175@1|root,COG1175@2|Bacteria,1MWB7@1224|Proteobacteria,2TSH3@28211|Alphaproteobacteria,43J0V@69277|PhyllobacteriaceaeGcontig478CDS65946+0
contig478_1KEGGK10237trehalose/maltose transport system permease proteincontig478CDS65946+0
contig478_1GOGO:0016020;GO:0055085;membrane; transmembrane transport;contig478CDS65946+0
contig478_1IPRSCANIPR000515ABC transporter type 1, transmembrane domain MetI-likecontig478CDS65946+0
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