Symbiotic Microorganism Data

Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics

Species	Host	Genome Size	Contig Count	Protein Count	GC Percentage	CheckM Completeness	CheckM Contamination	CheckM Strain Heterogeneity
uncultured Phyllobacterium sp.	Chrysomallon squamiferum	2,659,846	963	-	59.47	56.28	1.231	-

NCBI Metadata

Assembly Level	Assembly ID	GenBank ID	Bioproject	Biosample	Genome Category	NCBI Taxon ID	Isolation Source
Contig	PRJNA764822.B1	-	PRJNA764822	-	MAG	1871046	-

Gene Information

<< First 486 487 488 489 490 491 492 493 494 495 Forward> Last>> 1251 pages in total

Gene	Database	Annotation ID	Description	Contigs	Type	Start	end	Strand	Partial
contig441_3	IPRSCAN	IPR041255	LpxI N-terminal domain	contig441	CDS	919	1629	+	1
contig441_3	PFAM	PF17930	LpxI N-terminal domain	contig441	CDS	919	1629	+	1
contig442_1	EggNOG	COG0278@1\|root,COG0278@2\|Bacteria,1MZ4V@1224\|Proteobacteria,2U9QB@28211\|Alphaproteobacteria,43JZ9@69277\|Phyllobacteriaceae	O	contig442	CDS	1	228	-	10
contig442_1	KEGG	K07390	monothiol glutaredoxin	contig442	CDS	1	228	-	10
contig442_1	IPRSCAN	IPR002109	Glutaredoxin	contig442	CDS	1	228	-	10
contig442_1	PFAM	PF00462	Glutaredoxin	contig442	CDS	1	228	-	10
contig442_2	EggNOG	COG3698@1\|root,COG3698@2\|Bacteria,1NH9S@1224\|Proteobacteria,2TT5B@28211\|Alphaproteobacteria,43JQM@69277\|Phyllobacteriaceae	S	contig442	CDS	404	1147	+	0
contig442_2	IPRSCAN	IPR018711	Phosphodiester glycosidase	contig442	CDS	404	1147	+	0
contig442_2	PFAM	PF09992	Phosphodiester glycosidase	contig442	CDS	404	1147	+	0
contig442_3	EggNOG	COG0271@1\|root,COG0271@2\|Bacteria,1R3MM@1224\|Proteobacteria,2UBUW@28211\|Alphaproteobacteria,43KS8@69277\|Phyllobacteriaceae	T	contig442	CDS	1161	1394	-	0

TOP

Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.