Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig412_4EggNOGCOG1595@1|root,COG1595@2|Bacteria,1MX7T@1224|Proteobacteria,2VTRN@28216|Betaproteobacteria,1K356@119060|BurkholderiaceaeKcontig412CDS20502547-1
contig412_4KEGGK03088RNA polymerase sigma-70 factor, ECF subfamilycontig412CDS20502547-1
contig412_4GOGO:0003700;GO:0006352;GO:0006355;DNA-binding transcription factor activity; DNA-templated transcription initiation; regulation of DNA-templated transcription;contig412CDS20502547-1
contig412_4IPRSCANIPR007627RNA polymerase sigma-70 region 2contig412CDS20502547-1
contig412_4PFAMPF04542Sigma-70 region 2contig412CDS20502547-1
contig413_1EggNOG2EMKN@1|root,33F92@2|Bacteria,1NHNJ@1224|Proteobacteria,2UJWA@28211|Alphaproteobacteria,4BFF5@82115|Rhizobiaceae-contig413CDS8931210+0
contig413_2EggNOGCOG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2U195@28211|Alphaproteobacteria,3F0SR@335928|XanthobacteraceaeTcontig413CDS12833067-0
contig413_2KEGGK14986two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]contig413CDS12833067-0
contig413_2IPRSCANIPR003594Histidine kinase/HSP90-like ATPasecontig413CDS12833067-0
contig413_2PFAMPF02518Histidine kinase-, DNA gyrase B-, and HSP90-like ATPasecontig413CDS12833067-0
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