Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig407_5PFAMPF01979Amidohydrolase familycontig407CDS45605696+1
contig408_1EggNOGCOG1793@1|root,COG1793@2|Bacteria,1MV3S@1224|Proteobacteria,2TRQ9@28211|Alphaproteobacteria,43HMC@69277|PhyllobacteriaceaeLcontig408CDS21249-10
contig408_1KEGGK01971bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]contig408CDS21249-10
contig408_1GOGO:0003910;GO:0005524;GO:0006281;GO:0006310;DNA ligase (ATP) activity; ATP binding; DNA repair; DNA recombination;contig408CDS21249-10
contig408_1IPRSCANIPR012310DNA ligase, ATP-dependent, centralcontig408CDS21249-10
contig408_1PFAMPF01068ATP dependent DNA ligase domaincontig408CDS21249-10
contig408_2EggNOGCOG1236@1|root,COG1236@2|Bacteria,1MV7U@1224|Proteobacteria,2TQU5@28211|Alphaproteobacteria,43HAN@69277|PhyllobacteriaceaeJcontig408CDS12491614-1
contig408_2KEGGK07577putative mRNA 3-end processing factorcontig408CDS12491614-1
contig409_1EggNOGCOG0404@1|root,COG0665@1|root,COG0404@2|Bacteria,COG0665@2|Bacteria,1MUXJ@1224|Proteobacteria,2TRGS@28211|Alphaproteobacteria,43IB9@69277|PhyllobacteriaceaeEcontig409CDS2424+10
contig409_1KEGGK00314sarcosine dehydrogenase [EC:1.5.8.3]contig409CDS2424+10
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