Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig38_4EggNOGCOG0583@1|root,COG0583@2|Bacteria,1MWY0@1224|Proteobacteria,2TUTH@28211|AlphaproteobacteriaKcontig38CDS20092392-1
contig38_4KEGGK03566LysR family transcriptional regulator, glycine cleavage system transcriptional activatorcontig38CDS20092392-1
contig38_4IPRSCANIPR005119LysR, substrate-bindingcontig38CDS20092392-1
contig38_4PFAMPF03466LysR substrate binding domaincontig38CDS20092392-1
contig380_1EggNOGCOG1595@1|root,COG1595@2|Bacteria,1MZMC@1224|Proteobacteria,2TUUZ@28211|Alphaproteobacteria,2JTDN@204441|RhodospirillalesKcontig380CDS79609+0
contig380_1KEGGK03088RNA polymerase sigma-70 factor, ECF subfamilycontig380CDS79609+0
contig380_1GOGO:0003677;GO:0003700;GO:0006352;GO:0006355;GO:0016987;DNA binding; DNA-binding transcription factor activity; DNA-templated transcription initiation; regulation of DNA-templated transcription; sigma factor activity;contig380CDS79609+0
contig380_1IPRSCANIPR013249RNA polymerase sigma factor 70, region 4 type 2contig380CDS79609+0
contig380_1PFAMPF08281Sigma-70, region 4contig380CDS79609+0
contig380_2EggNOGCOG5662@1|root,COG5662@2|Bacteria,1N499@1224|Proteobacteria,2TV9Q@28211|Alphaproteobacteria,3JVUS@41294|BradyrhizobiaceaeKcontig380CDS6061382+0
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