Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig358_1EggNOGCOG4988@1|root,COG4988@2|Bacteria,1QU1N@1224|Proteobacteria,2TTGB@28211|AlphaproteobacteriaVcontig358CDS11215-10
contig358_1KEGGK16013ATP-binding cassette, subfamily C, bacterial CydDcontig358CDS11215-10
contig358_1GOGO:0005524;GO:0016020;GO:0055085;GO:0140359;ATP binding; membrane; transmembrane transport; ABC-type transporter activity;contig358CDS11215-10
contig358_1IPRSCANIPR011527ABC transporter type 1, transmembrane domaincontig358CDS11215-10
contig358_1PFAMPF00664ABC transporter transmembrane regioncontig358CDS11215-10
contig358_2EggNOGCOG1510@1|root,COG1510@2|Bacteria,1RA49@1224|Proteobacteria,2U2X2@28211|Alphaproteobacteria,43JF7@69277|PhyllobacteriaceaeKcontig358CDS12211793-0
contig358_2KEGGK22109HTH-type transcriptional regulator, glycine betaine synthesis regulatorcontig358CDS12211793-0
contig358_2GOGO:0003700;GO:0006355;DNA-binding transcription factor activity; regulation of DNA-templated transcription;contig358CDS12211793-0
contig358_2IPRSCANIPR000835MarR-type HTH domaincontig358CDS12211793-0
contig358_2PFAMPF12802MarR familycontig358CDS12211793-0
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