Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig346_3EggNOGCOG1595@1|root,COG1595@2|Bacteria,1MZMC@1224|Proteobacteria,2TUUZ@28211|Alphaproteobacteria,43ITM@69277|PhyllobacteriaceaeKcontig346CDS6461197+0
contig346_3KEGGK03088RNA polymerase sigma-70 factor, ECF subfamilycontig346CDS6461197+0
contig346_3GOGO:0003700;GO:0006352;GO:0006355;DNA-binding transcription factor activity; DNA-templated transcription initiation; regulation of DNA-templated transcription;contig346CDS6461197+0
contig346_3IPRSCANIPR007627RNA polymerase sigma-70 region 2contig346CDS6461197+0
contig346_3PFAMPF04542Sigma-70 region 2contig346CDS6461197+0
contig346_4EggNOGCOG0784@1|root,COG0784@2|Bacteria,1PE0S@1224|Proteobacteria,2UEDW@28211|Alphaproteobacteria,43KN2@69277|PhyllobacteriaceaeTcontig346CDS11801599-0
contig346_4KEGGK22010two-component system, response regulator PdtaRcontig346CDS11801599-0
contig346_5EggNOGCOG0664@1|root,COG0664@2|Bacteria,1PIN3@1224|Proteobacteria,2TSFE@28211|Alphaproteobacteria,43HWW@69277|PhyllobacteriaceaeKcontig346CDS17412496+0
contig346_5KEGGK01420CRP/FNR family transcriptional regulator, anaerobic regulatory proteincontig346CDS17412496+0
contig346_5IPRSCANIPR000595Cyclic nucleotide-binding domaincontig346CDS17412496+0
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