Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig320_2KEGGK14110energy-converting hydrogenase B subunit Acontig320CDS408809-0
contig320_3EggNOGCOG0564@1|root,COG0564@2|Bacteria,1MUBN@1224|Proteobacteria,2TSBK@28211|Alphaproteobacteria,43HUZ@69277|PhyllobacteriaceaeJcontig320CDS8661870+0
contig320_3KEGGK0618023S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]contig320CDS8661870+0
contig320_3GOGO:0001522;GO:0003723;GO:0009451;GO:0009982;pseudouridine synthesis; RNA binding; RNA modification; pseudouridine synthase activity;contig320CDS8661870+0
contig320_3IPRSCANIPR006145Pseudouridine synthase, RsuA/RluA-likecontig320CDS8661870+0
contig320_3PFAMPF00849RNA pseudouridylate synthasecontig320CDS8661870+0
contig320_4EggNOGCOG0568@1|root,COG0568@2|Bacteria,1MVWR@1224|Proteobacteria,2TR9Q@28211|Alphaproteobacteria,43IRT@69277|PhyllobacteriaceaeKcontig320CDS21273038+0
contig320_4KEGGK03089RNA polymerase sigma-32 factorcontig320CDS21273038+0
contig320_4GOGO:0003700;GO:0006352;GO:0006355;DNA-binding transcription factor activity; DNA-templated transcription initiation; regulation of DNA-templated transcription;contig320CDS21273038+0
contig320_4IPRSCANIPR007627RNA polymerase sigma-70 region 2contig320CDS21273038+0
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