Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig318_1IPRSCANIPR001712Type III secretion system FHIPEPcontig318CDS3532443+0
contig318_1PFAMPF00771FHIPEP familycontig318CDS3532443+0
contig318_2EggNOGCOG1684@1|root,COG1684@2|Bacteria,1NIF4@1224|Proteobacteria,2TTHN@28211|Alphaproteobacteria,43RAU@69277|PhyllobacteriaceaeNcontig318CDS24553213+0
contig318_2KEGGK02421flagellar biosynthesis protein FliRcontig318CDS24553213+0
contig318_2GOGO:0006605;GO:0016020;protein targeting; membrane;contig318CDS24553213+0
contig318_2IPRSCANIPR002010Type III secretion system inner membrane R proteincontig318CDS24553213+0
contig318_2PFAMPF01311Bacterial export proteins, family 1contig318CDS24553213+0
contig318_3EggNOG2AEK8@1|root,314FV@2|Bacteria,1PU4A@1224|Proteobacteria,2V5W3@28211|Alphaproteobacteria,1J368@118882|Brucellaceae-contig318CDS32153505+1
contig319_1EggNOGCOG5402@1|root,COG5402@2|Bacteria,1N26C@1224|Proteobacteria,2UBFZ@28211|Alphaproteobacteria,43JNG@69277|PhyllobacteriaceaeScontig319CDS3263+10
contig319_2EggNOGCOG5436@1|root,COG5436@2|Bacteria,1MW0D@1224|Proteobacteria,2TU65@28211|Alphaproteobacteria,43K65@69277|PhyllobacteriaceaeScontig319CDS256801+0
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