Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig314_4GOGO:0000160;phosphorelay signal transduction system;contig314CDS16002199+1
contig314_4IPRSCANIPR001789Signal transduction response regulator, receiver domaincontig314CDS16002199+1
contig314_4PFAMPF00072Response regulator receiver domaincontig314CDS16002199+1
contig315_1EggNOGCOG1595@1|root,COG1595@2|Bacteria,1R44W@1224|Proteobacteria,2U1R0@28211|Alphaproteobacteria,4BBNK@82115|RhizobiaceaeKcontig315CDS1852-10
contig315_1KEGGK03088RNA polymerase sigma-70 factor, ECF subfamilycontig315CDS1852-10
contig315_1GOGO:0003700;GO:0006352;GO:0006355;DNA-binding transcription factor activity; DNA-templated transcription initiation; regulation of DNA-templated transcription;contig315CDS1852-10
contig315_1IPRSCANIPR007627RNA polymerase sigma-70 region 2contig315CDS1852-10
contig315_1PFAMPF04542Sigma-70 region 2contig315CDS1852-10
contig315_2EggNOGCOG3224@1|root,COG3224@2|Bacteria,1N2DP@1224|Proteobacteria,2UBSR@28211|AlphaproteobacteriaScontig315CDS9191233-0
contig315_2GOGO:0016491;oxidoreductase activity;contig315CDS9191233-0
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