Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig281_2IPRSCANIPR000537UbiA prenyltransferase familycontig281CDS12411942-1
contig281_2PFAMPF01040UbiA prenyltransferase familycontig281CDS12411942-1
contig282_1EggNOGCOG5662@1|root,COG5662@2|Bacteria,1MV95@1224|Proteobacteria,2TVRG@28211|Alphaproteobacteria,4B8U9@82115|RhizobiaceaeKcontig282CDS38841-0
contig282_1KEGGK07167putative transcriptional regulatorcontig282CDS38841-0
contig282_2EggNOGCOG1595@1|root,COG1595@2|Bacteria,1NRNT@1224|Proteobacteria,2TT5K@28211|Alphaproteobacteria,4BECN@82115|RhizobiaceaeKcontig282CDS8381464-0
contig282_2KEGGK03088RNA polymerase sigma-70 factor, ECF subfamilycontig282CDS8381464-0
contig282_2GOGO:0003677;GO:0003700;GO:0006352;GO:0006355;GO:0016987;DNA binding; DNA-binding transcription factor activity; DNA-templated transcription initiation; regulation of DNA-templated transcription; sigma factor activity;contig282CDS8381464-0
contig282_2IPRSCANIPR013249RNA polymerase sigma factor 70, region 4 type 2contig282CDS8381464-0
contig282_2PFAMPF08281Sigma-70, region 4contig282CDS8381464-0
contig282_3EggNOGCOG0491@1|root,COG0491@2|Bacteria,1MY6G@1224|Proteobacteria,2TTBX@28211|Alphaproteobacteria,43MRK@69277|PhyllobacteriaceaeScontig282CDS19402914+0
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