Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig938_1KEGGK01790dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]contig938CDS54596-0
contig938_1GOGO:0008830;dTDP-4-dehydrorhamnose 3,5-epimerase activity;contig938CDS54596-0
contig938_1IPRSCANIPR000888dTDP-4-dehydrorhamnose 3,5-epimerase-likecontig938CDS54596-0
contig938_1PFAMPF00908dTDP-4-dehydrorhamnose 3,5-epimerasecontig938CDS54596-0
contig938_2EggNOGCOG0500@1|root,COG0500@2|Bacteria,1MVD1@1224|Proteobacteria,2TUKG@28211|Alphaproteobacteria,43MUV@69277|PhyllobacteriaceaeQcontig938CDS9131833+1
contig938_2KEGGK12710C-methyltransferase [EC:2.1.1.-]contig938CDS9131833+1
contig938_2IPRSCANIPR013630Methyltransferase putative zinc binding domaincontig938CDS9131833+1
contig938_2PFAMPF08421Putative zinc binding domaincontig938CDS9131833+1
contig939_1EggNOGCOG0583@1|root,COG0583@2|Bacteria,1MU2E@1224|Proteobacteria,2TUNU@28211|Alphaproteobacteria,4B73Y@82115|RhizobiaceaeKcontig939CDS3371230-0
contig939_1KEGGK24082LysR family transcriptional regulator, regulator of peptidoglycan recyclingcontig939CDS3371230-0
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