Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig925_1PFAMPF00873AcrB/AcrD/AcrF familycontig925CDS12616-10
contig926_1EggNOGCOG1309@1|root,COG1309@2|Bacteria,1NCEF@1224|Proteobacteria,2TR7K@28211|Alphaproteobacteria,43PPY@69277|PhyllobacteriaceaeKcontig926CDS2463-10
contig926_1KEGGK22041TetR/AcrR family transcriptional regulator, copper-responsive repressorcontig926CDS2463-10
contig926_1GOGO:0003677;DNA binding;contig926CDS2463-10
contig926_1IPRSCANIPR001647DNA-binding HTH domain, TetR-typecontig926CDS2463-10
contig926_1PFAMPF00440Bacterial regulatory proteins, tetR familycontig926CDS2463-10
contig926_2EggNOGCOG0845@1|root,COG0845@2|Bacteria,1MU78@1224|Proteobacteria,2TSWK@28211|Alphaproteobacteria,43K3R@69277|PhyllobacteriaceaeMcontig926CDS6321621+1
contig926_2KEGGK18901membrane fusion protein, multidrug efflux systemcontig926CDS6321621+1
contig926_2IPRSCANIPR032317RND efflux pump, membrane fusion protein, barrel-sandwich domaincontig926CDS6321621+1
contig926_2PFAMPF16576Barrel-sandwich domain of CusB or HlyD membrane-fusioncontig926CDS6321621+1
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