Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig903_2IPRSCANIPR000620EamA domaincontig903CDS13632253-0
contig903_2PFAMPF00892EamA-like transporter familycontig903CDS13632253-0
contig903_3EggNOGCOG2207@1|root,COG2207@2|Bacteria,1R6EY@1224|Proteobacteria,2VF6U@28211|Alphaproteobacteria,4BN7G@82115|RhizobiaceaeKcontig903CDS23342735-1
contig903_3KEGGK07506AraC family transcriptional regulatorcontig903CDS23342735-1
contig903_3GOGO:0003700;GO:0006355;GO:0043565;DNA-binding transcription factor activity; regulation of DNA-templated transcription; sequence-specific DNA binding;contig903CDS23342735-1
contig903_3IPRSCANIPR018060DNA binding HTH domain, AraC-typecontig903CDS23342735-1
contig903_3PFAMPF12833Helix-turn-helix domaincontig903CDS23342735-1
contig904_1EggNOGCOG0797@1|root,COG0797@2|Bacteria,1MZ8S@1224|Proteobacteria,2TUER@28211|Alphaproteobacteria,43HYY@69277|PhyllobacteriaceaeMcontig904CDS1297+10
contig904_2EggNOGCOG1686@1|root,COG1686@2|Bacteria,1MUU7@1224|Proteobacteria,2TS1P@28211|Alphaproteobacteria,43JHP@69277|PhyllobacteriaceaeMcontig904CDS2661495+0
contig904_2KEGGK07258serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]contig904CDS2661495+0
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