Symbiotic Microorganism Data

Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics

Species	Host	Genome Size	Contig Count	Protein Count	GC Percentage	CheckM Completeness	CheckM Contamination	CheckM Strain Heterogeneity
uncultured Phyllobacterium sp.	Chrysomallon squamiferum	2,659,846	963	-	59.47	56.28	1.231	-

NCBI Metadata

Assembly Level	Assembly ID	GenBank ID	Bioproject	Biosample	Genome Category	NCBI Taxon ID	Isolation Source
Contig	PRJNA764822.B1	-	PRJNA764822	-	MAG	1871046	-

Gene Information

<< First 1123 1124 1125 1126 1127 1128 1129 1130 1131 1132 Forward> Last>> 1251 pages in total

Gene	Database	Annotation ID	Description	Contigs	Type	Start	end	Strand	Partial
contig880_2	KEGG	K07156	copper resistance protein C	contig880	CDS	300	830	-	0
contig880_3	EggNOG	COG1280@1\|root,COG1280@2\|Bacteria,1RD4I@1224\|Proteobacteria,2U25W@28211\|Alphaproteobacteria	E	contig880	CDS	839	1489	-	0
contig880_3	KEGG	K05835	threonine efflux protein	contig880	CDS	839	1489	-	0
contig880_3	GO	GO:0006865;GO:0016020;	amino acid transport; membrane;	contig880	CDS	839	1489	-	0
contig880_3	IPRSCAN	IPR001123	Amino acid exporter protein, LeuE-type	contig880	CDS	839	1489	-	0
contig880_3	PFAM	PF01810	LysE type translocator	contig880	CDS	839	1489	-	0
contig880_4	EggNOG	COG2764@1\|root,COG2764@2\|Bacteria,1REKV@1224\|Proteobacteria,2U74S@28211\|Alphaproteobacteria,43K0Y@69277\|Phyllobacteriaceae	S	contig880	CDS	1492	1932	-	1
contig880_4	KEGG	K04750	PhnB protein	contig880	CDS	1492	1932	-	1
contig880_4	IPRSCAN	IPR004360	Glyoxalase/fosfomycin resistance/dioxygenase domain	contig880	CDS	1492	1932	-	1
contig880_4	PFAM	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	contig880	CDS	1492	1932	-	1

TOP

Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.