Symbiotic Microorganism Data

Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics

Species	Host	Genome Size	Contig Count	Protein Count	GC Percentage	CheckM Completeness	CheckM Contamination	CheckM Strain Heterogeneity
uncultured Phyllobacterium sp.	Chrysomallon squamiferum	2,659,846	963	-	59.47	56.28	1.231	-

NCBI Metadata

Assembly Level	Assembly ID	GenBank ID	Bioproject	Biosample	Genome Category	NCBI Taxon ID	Isolation Source
Contig	PRJNA764822.B1	-	PRJNA764822	-	MAG	1871046	-

Gene Information

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Gene	Database	Annotation ID	Description	Contigs	Type	Start	end	Strand	Partial
contig866_4	PFAM	PF13377	Periplasmic binding protein-like domain	contig866	CDS	3196	4233	+	0
contig867_1	EggNOG	COG0841@1\|root,COG0841@2\|Bacteria,1MU48@1224\|Proteobacteria,2TQT0@28211\|Alphaproteobacteria,43H28@69277\|Phyllobacteriaceae	V	contig867	CDS	3	2147	-	10
contig867_1	KEGG	K21134	multidrug efflux pump	contig867	CDS	3	2147	-	10
contig867_1	GO	GO:0016020;GO:0022857;GO:0055085;	membrane; transmembrane transporter activity; transmembrane transport;	contig867	CDS	3	2147	-	10
contig867_1	IPRSCAN	IPR001036	Acriflavin resistance protein	contig867	CDS	3	2147	-	10
contig867_1	PFAM	PF00873	AcrB/AcrD/AcrF family	contig867	CDS	3	2147	-	10
contig867_2	EggNOG	COG0845@1\|root,COG0845@2\|Bacteria,1R4GC@1224\|Proteobacteria,2TUKB@28211\|Alphaproteobacteria,3JTWY@41294\|Bradyrhizobiaceae	M	contig867	CDS	2144	2815	-	1
contig867_2	KEGG	K21137	membrane fusion protein, multidrug efflux system	contig867	CDS	2144	2815	-	1
contig867_2	IPRSCAN	-	-	contig867	CDS	2144	2815	-	1
contig867_2	PFAM	PF13437	HlyD family secretion protein	contig867	CDS	2144	2815	-	1

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Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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