Symbiotic Microorganism Data

Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics

Species	Host	Genome Size	Contig Count	Protein Count	GC Percentage	CheckM Completeness	CheckM Contamination	CheckM Strain Heterogeneity
uncultured Phyllobacterium sp.	Chrysomallon squamiferum	2,659,846	963	-	59.47	56.28	1.231	-

NCBI Metadata

Assembly Level	Assembly ID	GenBank ID	Bioproject	Biosample	Genome Category	NCBI Taxon ID	Isolation Source
Contig	PRJNA764822.B1	-	PRJNA764822	-	MAG	1871046	-

Gene Information

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Gene	Database	Annotation ID	Description	Contigs	Type	Start	end	Strand	Partial
contig857_1	PFAM	PF03743	Bacterial conjugation TrbI-like protein	contig857	CDS	1	1191	-	10
contig857_2	EggNOG	COG3504@1\|root,COG3504@2\|Bacteria,1MVHJ@1224\|Proteobacteria,2U07J@28211\|Alphaproteobacteria,4B9QD@82115\|Rhizobiaceae	U	contig857	CDS	1191	2003	-	0
contig857_2	KEGG	K03204	type IV secretion system protein VirB9	contig857	CDS	1191	2003	-	0
contig857_2	IPRSCAN	IPR010258	Conjugal transfer, TrbG/VirB9/CagX	contig857	CDS	1191	2003	-	0
contig857_2	PFAM	PF03524	Conjugal transfer protein	contig857	CDS	1191	2003	-	0
contig857_3	EggNOG	COG3736@1\|root,COG3736@2\|Bacteria,1MXRC@1224\|Proteobacteria,2U2AZ@28211\|Alphaproteobacteria,4BAP6@82115\|Rhizobiaceae	U	contig857	CDS	2003	2695	-	0
contig857_3	KEGG	K03203	type IV secretion system protein VirB8	contig857	CDS	2003	2695	-	0
contig857_3	GO	GO:0016020;	membrane;	contig857	CDS	2003	2695	-	0
contig857_3	IPRSCAN	IPR007430	Bacterial virulence protein VirB8	contig857	CDS	2003	2695	-	0
contig857_3	PFAM	PF04335	VirB8 protein	contig857	CDS	2003	2695	-	0

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Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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