Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig832_3EggNOGCOG0583@1|root,COG0583@2|Bacteria,1MXRP@1224|Proteobacteria,1S0R2@1236|GammaproteobacteriaKcontig832CDS14682283+1
contig832_3KEGGK21757LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genescontig832CDS14682283+1
contig832_3IPRSCANIPR005119LysR, substrate-bindingcontig832CDS14682283+1
contig832_3PFAMPF03466LysR substrate binding domaincontig832CDS14682283+1
contig833_1EggNOGCOG0842@1|root,COG0842@2|Bacteria,1MUH1@1224|Proteobacteria,2TQSY@28211|Alphaproteobacteria,43HVA@69277|PhyllobacteriaceaeVcontig833CDS3419-10
contig833_1KEGGK09694lipooligosaccharide transport system permease proteincontig833CDS3419-10
contig833_1GOGO:0016020;GO:0140359;membrane; ABC-type transporter activity;contig833CDS3419-10
contig833_1IPRSCANIPR013525ABC-2 type transporter, transmembrane domaincontig833CDS3419-10
contig833_1PFAMPF01061ABC-2 type transportercontig833CDS3419-10
contig833_2EggNOGCOG1131@1|root,COG1131@2|Bacteria,1MUW7@1224|Proteobacteria,2TR2Q@28211|Alphaproteobacteria,43HHC@69277|PhyllobacteriaceaeVcontig833CDS4161342-0
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